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snakemake autocompletion

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Daniel Bauer
2019-03-25 08:16:45 +01:00
parent b460eb596d
commit 6999216766
2 changed files with 11 additions and 0 deletions
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10
profiles/base/.functions Normal file
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@@ -0,0 +1,10 @@
sm_autocomplete() {
# make zsh emulate bash if necessary
if [[ -n "$ZSH_VERSION" ]]; then
autoload bashcompinit
bashcompinit
fi
snakemake_options=$(snakemake --snakefile Snakefile --list)
complete -W "${snakemake_options}" 'snakemake'
}

1
profiles/base/.zshrc
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@@ -18,6 +18,7 @@ if [ -f "$HOME/.environment.local" ]; then
fi fi
source $HOME/.aliases source $HOME/.aliases
source $HOME/.functions
if [ -z "$GMXRC" ]; then if [ -z "$GMXRC" ]; then
GMXRC="/opt/gromacs-2018/bin/GMXRC" GMXRC="/opt/gromacs-2018/bin/GMXRC"