8 Commits

Author SHA1 Message Date
Daniel Bauer
b29f19d78a add middleware to add signposting links into html head (#3)
* add middleware to add signposting links into html head
2024-11-25 15:44:46 +01:00
Daniel Bauer
06d745e4a4 more documentation on examples 2024-11-22 11:53:00 +01:00
Daniel Bauer
7a414e5772 refactoring on the readme 2024-11-22 10:49:44 +01:00
Daniel Bauer
d11f2246df readme about parseing JSON-LD manually 2024-11-22 10:41:51 +01:00
Daniel Bauer
f2a803106f add RO-Crate parsing to readme 2024-11-22 10:13:42 +01:00
Daniel Bauer
6b1ea1403c Create Signposting from RO-Crate (#2)
* improvate jsonld parsing to be compatible with ro-crate

* refactoring

* example with RO-Crate

* bump version

---------

Co-authored-by: Daniel Bauer <daniel.bauer@senckenberg.de>
2024-11-21 15:40:46 +01:00
Daniel Bauer
f97c33e418 update TODOs 2024-11-21 10:44:00 +01:00
Daniel Bauer
0f27560015 fix pip install example 2024-11-19 08:28:22 +01:00
12 changed files with 805 additions and 98 deletions

View File

@@ -15,16 +15,43 @@ Based on the [Signposting](https://github.com/stain/signposting) library.
- Supports multiple relation types with optional media type specification.
- Easily integrable with existing Django applications.
### Signposts are formatted and added as Link headers
```bash
curl -I http://localhost:8000
HTTP/2 200
...
link: <https://schema.org/Dataset> ; rel="type" ,
<https://orcid.org/0000-0001-9447-460X> ; rel="author" ,
<https://example.com/download.zip> ; rel="item" ; type="application/zip"
```
## Installation
```bash
pip install django_signposting
pip install django-signposting
```
## Usage
### Automatic parsing of JSON-LD
The library can automatically add signposts to web pages that already make
metadata available via JSON-LD in HTML via `<script type="application/ld+json">` tags, i.e.:
```HTML
<!DOCTYPE html>
<html>
<head>
<script type="application/ld+json">{"@context": "https://schema.org", "@type": ["WebSite", "Dataset"], "author": {"@type": "Person", "name": "Daniel Bauer", "url": "https://orcid.org/0000-0001-9447-460X"}, "description": "A dataset of things.", "hasPart": [{"@type": "ImageObject", "encodingFormat": "image/png", "url": "http://example.com/image.png"}, {"@type": "ImageObject", "encodingFormat": "image/png", "url": "http://example.com/image2.png"}], "license": {"@type": "CreativeWork", "name": "CC BY 4.0", "url": "https://creativecommons.org/licenses/by/4.0/"}, "name": "My Dataset", "sameAs": [{"@type": "MediaObject", "contentUrl": "https://example.com/download.zip", "encodingFormat": "application/zip"}, {"@type": "MediaObject", "contentUrl": "https://example.com/metadata.json"}], "url": "https://example.com"}</script>
</head>
<body>
<p>Hello, world!</p>
</body>
</html>
```
To enable automatic parsing of JSON-LD, add the following middleware classes to your Django project's MIDDLEWARE setting in settings.py:
```python
@@ -36,15 +63,20 @@ MIDDLEWARE = [
]
```
This setup allows django_signposting to extract JSON-LD embedded in HTML `<script type="application/ld+json">` tags
and add the corresponding signposting headers.
Its compatible with tools that provide JSON-LD, such as [django-json-ld](https://pypi.org/project/django-json-ld/).
This extracts supported metadatad properties from JSON-LD and adds the corresponding signposting headers to the `HttpResponse` automatically.
Automatic parsing is compatible with extensions that provide JSON-LD as part of a web page, such as [django-json-ld](https://pypi.org/project/django-json-ld/).
It can also extract signposts from rich metadata descriptions of datasets such as detached [RO-Crates](https://www.researchobject.org/ro-crate) (see [example views](./example/example/views.py)).
> Note: The middleware order is important! Place `SignpostingMiddleware` before `JsonLdSignpostingParserMiddleware` to ensure proper extraction and processing of JSON-LD content.
## Alternative approaches
### Manual signposting
For cases where JSON-LD is not embedded, or you want to specify headers manually, you can use the `add_signposts` utility.
For cases where there is no embedded JSON-LD, or you want to specify additional headers manually, you can use the `add_signposts` utility function.
This still requires the `SignpostingMiddleware` to inject the links into
the response:
1. **Add Middleware**: Add the `SignpostingMiddleware` to your Django project's `MIDDLEWARE` setting in `settings.py`:
@@ -77,21 +109,57 @@ def my_view(request):
return response
```
## Signposts are formatted and added as Link headers by the middleware
### Manual parsing of JSON-LD
```bash
curl -I http://localhost:8000
HTTP/2 200
...
link: <https://schema.org/Dataset> ; rel="type" ,
<https://orcid.org/0000-0001-9447-460X> ; rel="author" ,
<https://example.com/download.zip> ; rel="item" ; type="application/zip"
If you have metadata in JSON-LD available, but it is not rendered as part of the response, you can still parse it and add the signposting links manually:
```python
from django.http import HttpResponse
from django_signposting.utils import add_signposts, jsonld_to_signposts
response = HttpResponse("Hello World")
json_ld = {
"@context": "http://schema.org/",
"@graph": [
...
]
}
signposts = jsonld_to_signposts(json_ld)
add_signposts(response, **signposts)
```
### Add signposts as HTML links instead of headers
In cases where you want to include signposting directly in the HTML response rather than as HTTP headers
(for example because headers are overwritten by a proxy or something else),
you can use the `HtmlSignpostingMiddleware` instead of `SignpostingMiddleware`.
This middleware automatically adds <link> elements to the HTML <head> section based
on the detected signposting metadata and produces output similar to the one shown here:
```HTML
<!DOCTYPE html>
<html>
<head>
(...)
<link href="http://schema.org/WebSite" rel="type"/>
<link href="http://schema.org/Dataset" rel="type"/>
<link href="https://orcid.org/0000-0001-9447-460X" rel="author"/>
<link href="https://creativecommons.org/licenses/by/4.0/" rel="license"/>
<link href="https://example.com" rel="cite-as"/>
<link href="https://example.com/download.zip" rel="describedby" type="application/zip"/>
<link href="https://example.com/metadata.json" rel="describedby"/>
<link href="http://example.com/image.png" rel="item" type="image/png"/>
<link href="http://example.com/image2.png" rel="item" type="image/png"/>
</head>
...
</html>
```
## TODO
- [ ] Option to add signposts in HTML via <link> elements.
- [ ] Add support for link sets
- [ ] Add support for specifying profile extension attribute
## License

View File

@@ -1,14 +1,12 @@
from typing import Callable
from django.http import HttpRequest, HttpResponse
from signposting import Signpost, LinkRel
from signposting import Signpost
from bs4 import BeautifulSoup
import re
import json
from django.utils.deprecation import MiddlewareMixin
from django.conf import settings
from rdflib import Graph
from . import sparql
from .utils import jsonld_to_signposts
class SignpostingMiddleware:
@@ -44,70 +42,49 @@ class SignpostingMiddleware:
response["Link"] = " , ".join(link_snippets)
class HtmlSignpostingMiddleware(SignpostingMiddleware):
def __init__(self, get_response: Callable[[HttpRequest], HttpResponse]):
self.get_response = get_response
def __call__(self, request: HttpRequest) -> HttpResponse:
response = self.get_response(request)
if not hasattr(response, "_signposts"):
return response
# Adding Signposts via HTML is only supported for HTML responses
if not response.headers["Content-Type"].startswith("text/html"):
return response
content = response.content.decode("utf-8")
soup = BeautifulSoup(content, "html.parser")
# Html should have a root element
if not soup.html:
raise Exception("Could not find HTML root element")
# Add head element if not present
if not soup.head:
head_tag = soup.new_tag("head")
soup.html.insert(0, head_tag)
# BUild links for each signpost and add them to the html
for signpost in response._signposts:
link_tag = soup.new_tag("link")
link_tag["rel"] = signpost.rel
link_tag["href"] = signpost.target
if signpost.type:
link_tag["type"] = signpost.type
soup.head.append(link_tag)
# Override the original content with the new HTML
response.content = soup.prettify().encode("utf-8")
response["Content-Length"] = len(response.content)
return response
class JsonLdSignpostingParserMiddleware(MiddlewareMixin):
def is_url(self, url: str) -> bool:
url_pattern = re.compile(
r"^(https?|ftp)://" # protocol
r"(?:(?:[a-zA-Z0-9-_]+\.)?[a-zA-Z0-9-]+\.[a-zA-Z]{2,6})" # domain
r"(?::\d{1,5})?" # optional port
r"(?:/.*)?$" # path
)
return bool(url_pattern.match(url))
def select_url(self, elements: tuple[str, ...]) -> str | None:
for elem in elements[::-1]:
if self.is_url(str(elem)):
return str(elem)
return None
def _jsonld_to_signposts(self, jsonld: dict) -> dict:
signposts = []
# TODO use jsonld context in query as prefix
g = Graph().parse(data=json.dumps(jsonld), format="json-ld")
rootElement = next(iter(sparql.root_element_query(g)), None)
if rootElement:
rootElement = rootElement[0]
else:
print("No root element found")
return {}
types = sparql.type_query(g, rootElement)
for type in types:
signposts.append(Signpost(LinkRel.type, str(type[0])))
authors = sparql.author_query(g, rootElement)
for author in authors:
author = self.select_url(author)
if author:
signposts.append(Signpost(LinkRel.author, author))
license = next(iter(sparql.license_query(g, rootElement)), [])
license = self.select_url(license)
if license:
signposts.append(Signpost(LinkRel.license, license))
citations = sparql.cite_query(g, rootElement)
for citation in citations:
citation = self.select_url(citation)
if citation:
signposts.append(Signpost(LinkRel.cite_as, citation))
sameas = sparql.sameas_query(g, rootElement)
for sa in sameas:
sa_media_type = sa[-1]
sa = self.select_url(sa[:-1])
if sa:
signposts.append(Signpost(LinkRel.describedby, sa, sa_media_type))
items = sparql.item_query(g, rootElement)
for item in items:
item_media_type = item[-1]
item = self.select_url(item[:-1])
if item:
signposts.append(Signpost(LinkRel.item, item, item_media_type))
return signposts
def process_response(
self, request: HttpRequest, response: HttpResponse
) -> HttpResponse:
@@ -119,7 +96,7 @@ class JsonLdSignpostingParserMiddleware(MiddlewareMixin):
for script in soup.find_all("script", type="application/ld+json"):
try:
jsonld = json.loads(script.string)
signposts = self._jsonld_to_signposts(jsonld)
signposts = jsonld_to_signposts(jsonld)
response._signposts = signposts
except json.JSONDecodeError as e:

View File

@@ -14,7 +14,21 @@ WHERE {
(schema:license | schema:author | schema:creator ) ?value .
# No incoming edges for ?rootElement
FILTER NOT EXISTS { ?s ?p ?rootElement }
FILTER NOT EXISTS {
?incoming ?p ?rootElement .
# also allow incoming edges that link entities BACK to the dataset
FILTER(?p != schema:isPartOf)
FILTER(?p != schema:mainEntityOfPage)
FILTER(?p != schema:recordedIn)
FILTER(?p != schema:exampleOfWork)
FILTER(?p != schema:includedInDataCatalogue)
FILTER(?p != schema:subjectOf)
FILTER(?p != schema:dataset)
# allow incoming edges from ro-crate-metadata.json
FILTER(CONTAINS(?incoming, "ro-crate-metadata.json")) .
}
}
LIMIT 1
""")

View File

@@ -1,5 +1,10 @@
import json
from django.http import HttpResponse
from signposting import Signpost
from rdflib import Graph
from signposting import Signpost, LinkRel
import re
from django_signposting import sparql
def add_signposts(response: HttpResponse, *args: Signpost):
@@ -15,3 +20,67 @@ def add_signposts(response: HttpResponse, *args: Signpost):
for signpost in args:
if signpost not in response._signposts:
response._signposts.append(signpost)
def select_url(elements: tuple[str, ...]) -> str | None:
def is_url(url: str) -> bool:
url_pattern = re.compile(
r"^(https?|ftp)://" # protocol
r"(?:(?:[a-zA-Z0-9-_]+\.)?[a-zA-Z0-9-]+\.[a-zA-Z]{2,6})" # domain
r"(?::\d{1,5})?" # optional port
r"(?:/.*)?$" # path
)
return bool(url_pattern.match(url))
for elem in elements[::-1]:
if is_url(str(elem)):
return str(elem)
return None
def jsonld_to_signposts(jsonld: dict) -> []:
signposts = []
# TODO use jsonld context in query as prefix
g = Graph().parse(data=json.dumps(jsonld), format="json-ld")
rootElement = next(iter(sparql.root_element_query(g)), None)
if rootElement:
rootElement = rootElement[0]
else:
print("No root element found")
return {}
types = sparql.type_query(g, rootElement)
for type in types:
signposts.append(Signpost(LinkRel.type, str(type[0])))
authors = sparql.author_query(g, rootElement)
for author in authors:
author = select_url(author)
if author:
signposts.append(Signpost(LinkRel.author, author))
license = next(iter(sparql.license_query(g, rootElement)), [])
license = select_url(license)
if license:
signposts.append(Signpost(LinkRel.license, license))
citations = sparql.cite_query(g, rootElement)
for citation in citations:
citation = select_url(citation)
if citation:
signposts.append(Signpost(LinkRel.cite_as, citation))
sameas = sparql.sameas_query(g, rootElement)
for sa in sameas:
sa_media_type = sa[-1]
sa = select_url(sa[:-1])
if sa:
signposts.append(Signpost(LinkRel.describedby, sa, sa_media_type))
items = sparql.item_query(g, rootElement)
for item in items:
item_media_type = item[-1]
item = select_url(item[:-1])
if item:
signposts.append(Signpost(LinkRel.item, item, item_media_type))
return signposts

View File

@@ -49,6 +49,7 @@ MIDDLEWARE = [
'django.contrib.messages.middleware.MessageMiddleware',
'django.middleware.clickjacking.XFrameOptionsMiddleware',
'django_signposting.middleware.SignpostingMiddleware',
# 'django_signposting.middleware.HtmlSignpostingMiddleware',
'django_signposting.middleware.JsonLdSignpostingParserMiddleware',
]

View File

@@ -21,4 +21,5 @@ from . import views
urlpatterns = [
path("", views.SimpleView.as_view()),
path("jsonld", views.JsonLdView.as_view()),
path("ro-crate", views.rocrate.as_view()),
]

View File

@@ -1,14 +1,14 @@
from django.http import HttpResponse
from django.views import View
from django.shortcuts import render
from django.views import View
from django_json_ld.views import JsonLdContextMixin
from django_signposting.utils import add_signposts
from signposting import LinkRel, Signpost
from signposting import Signpost, LinkRel
from django_signposting.utils import add_signposts, jsonld_to_signposts
class SimpleView(View):
""" A simple view that adds signposting headers to the response."""
def get(self, request):
response = HttpResponse("Hello, world!")
@@ -17,13 +17,15 @@ class SimpleView(View):
add_signposts(
response,
Signpost(LinkRel.type, "http://schema.org/Dataset"),
Signpost(LinkRel.author, "https://orcid.org/0000-0001-9447-460X")
Signpost(LinkRel.author, "https://orcid.org/0000-0001-9447-460X"),
)
return response
class JsonLdView(JsonLdContextMixin, View):
""" A view that automatically adds signposting headers to the response based on
the JSON-LD metadata in the response."""
sd = {
"@context": "https://schema.org",
@@ -35,12 +37,12 @@ class JsonLdView(JsonLdContextMixin, View):
{
"@type": "MediaObject",
"contentUrl": "https://example.com/download.zip",
"encodingFormat": "application/zip"
"encodingFormat": "application/zip",
},
{
"@type": "MediaObject",
"contentUrl": "https://example.com/metadata.json",
}
},
],
"author": {
"@type": "Person",
@@ -50,21 +52,87 @@ class JsonLdView(JsonLdContextMixin, View):
"license": {
"@type": "CreativeWork",
"name": "CC BY 4.0",
"url": "https://creativecommons.org/licenses/by/4.0/"
"url": "https://creativecommons.org/licenses/by/4.0/",
},
"hasPart": [
{
"@type": "ImageObject",
"url": "http://example.com/image.png",
"encodingFormat": "image/png"
"encodingFormat": "image/png",
},
{
"@type": "ImageObject",
"url": "http://example.com/image2.png",
"encodingFormat": "image/png"
}
]
"encodingFormat": "image/png",
},
],
}
def get(self, request):
return render(request, "jsonld.html", context={"sd": self.sd})
class rocrate(JsonLdContextMixin, View):
""" A view that adds signposting headers from the metadata of a detached RO-Crate."""
def get(self, request):
import json
import os
import tempfile
# Build an RO-Crate and serve its preview
from rocrate.model.person import Person
from rocrate.model.creativework import CreativeWork
from rocrate.rocrate import ROCrate
with tempfile.TemporaryDirectory() as d:
crate = ROCrate(gen_preview=True)
crate.add_file(
"http://example.com/test.pdf",
properties={"name": "test file", "encodingFormat": "application/pdf"},
)
author = crate.add(
Person(
crate,
"https://orcid.org/0000-0001-9447-460X",
properties={"name": "Daniel Bauer"},
)
)
license = crate.add(
CreativeWork(
crate,
"https://spdx.org/licenses/CC0-1.0",
properties={
"@id": "https://spdx.org/licenses/CC0-1.0",
"@type": "CreativeWork",
"name": "CC0-1.0",
"description": "Creative Commons Zero v1.0 Universal",
},
)
)
sameAs = crate.add(
CreativeWork(
crate,
"https://example.com/ro-crate-metadata.json",
properties={"encodingFormat": "application/ld+json"},
)
)
crate.root_dataset["name"] = "My Dataset"
crate.root_dataset["description"] = "A dataset of things."
crate.root_dataset["author"] = author
crate.root_dataset["creator"] = author
crate.root_dataset["license"] = license
crate.root_dataset["url"] = "https://example.com"
crate.root_dataset["sameAs"] = sameAs
crate.write(d)
# Extract JSON-LD from RO-Crate metadata and build signposts from it
metadata = open(os.path.join(d, "ro-crate-metadata.json"), "r").read()
metadata = json.loads(metadata)
signposts = jsonld_to_signposts(metadata)
preview = open(os.path.join(d, "ro-crate-preview.html"), "r").read()
response = HttpResponse(preview)
add_signposts(response, *signposts)
return response

View File

@@ -15,3 +15,4 @@ signposting==0.9.9
soupsieve==2.6
sqlparse==0.5.1
urllib3==2.2.3
rocrate==0.11.0

View File

@@ -8,7 +8,7 @@ authors = [
{name = "Daniel Bauer", email = "github@dbauer.me"}
]
description = "Add FAIR signpostings to response headers in Django"
version = "0.10.1"
version = "0.11.0"
readme = "README.md"
requires-python = ">=3.10"
dependencies = [

View File

@@ -0,0 +1,112 @@
from bs4 import BeautifulSoup
from django.http import HttpResponse, JsonResponse
from django_signposting.middleware import HtmlSignpostingMiddleware
from signposting import LinkRel, Signpost
import pytest
def assert_links_exist(response: HttpResponse, signposts: list[Signpost] = None):
if signposts is None:
signposts = response._signposts
soup = BeautifulSoup(response.content.decode("utf-8"), "html.parser")
for signpost in signposts:
links = soup.find_all("link", href=signpost.target, rel=signpost.rel)
assert len(links) == 1
assert len(soup.find_all("link")) == len(signposts)
def test_middleware_no_signposting():
response = HttpResponse("<html><head></head><body></body></html>")
response.status_code = 200
middleware = HtmlSignpostingMiddleware(lambda request: response)
response = middleware(None)
assert_links_exist(response, [])
def test_middleware_no_html():
response = JsonResponse({"hello": "world"})
response.status_code = 200
response._signpost = [Signpost(LinkRel.author, "http://example.com")]
middleware = HtmlSignpostingMiddleware(lambda request: response)
middleware(None)
assert_links_exist(response, [])
def test_middleware_malformed_html():
response = HttpResponse("Hello world")
response.status_code = 200
response.content_type = "text/html"
response._signposts = [Signpost(LinkRel.author, "http://example.com")]
middleware = HtmlSignpostingMiddleware(lambda request: response)
with pytest.raises(Exception):
middleware(None)
def test_middleware_signposting_without_head():
response = HttpResponse("<html><body></body></html>")
response.status_code = 200
response._signposts = [Signpost(LinkRel.author, "http://example.com")]
middleware = HtmlSignpostingMiddleware(lambda request: response)
middleware(None)
assert_links_exist(response)
def test_middleware_signposting():
response = HttpResponse("<html><head></head><body></body></html>")
response.status_code = 200
response._signposts = [Signpost(LinkRel.author, "http://example.com")]
middleware = HtmlSignpostingMiddleware(lambda request: response)
middleware(None)
assert_links_exist(response)
def test_middleware_multiple_signposts():
response = HttpResponse("<html><head></head><body></body></html>")
response.status_code = 200
response._signposts = [
Signpost(LinkRel.author, "http://example.com"),
Signpost(LinkRel.author, "http://example2.com"),
Signpost(LinkRel.cite_as, "http://example3.com"),
]
middleware = HtmlSignpostingMiddleware(lambda request: response)
response = middleware(None)
assert_links_exist(response)
def test_middleware_signpost_with_content_type():
response = HttpResponse("<html><head></head><body></body></html>")
response.status_code = 200
response._signposts = [Signpost(LinkRel.item, "http://example.com", "text/json")]
middleware = HtmlSignpostingMiddleware(lambda request: response)
response = middleware(None)
assert_links_exist(response)
def test_middleware_ignore_error_responses():
response = HttpResponse("<html><head></head><body></body></html>")
response.status_code = 400
response._signposts = [Signpost(LinkRel.author, "http://example.com")]
middleware = HtmlSignpostingMiddleware(lambda request: response)
response = middleware(None)
assert_links_exist(response)
def test_middleware_type_link():
response = HttpResponse("<html><head></head><body></body></html>")
response.status_code = 200
response._signposts = [Signpost(LinkRel.type, "http://schema.org/Dataset")]
middleware = HtmlSignpostingMiddleware(lambda request: response)
response = middleware(None)
assert_links_exist(response)

View File

@@ -218,3 +218,53 @@ def test_jsonld_signposting_multiple_types():
Signpost(LinkRel.author, "http://example.com/author"),
],
)
def test_jsonld_signposting_rocrate():
jsonld_test_runner(
{
"@context": "http://w3id.org/ro/crate/1.1/context",
"@graph": [
{
"@type": "CreativeWork",
"@id": "ro-crate-metadata.json",
"conformsTo": {"@id": "http://w3id.org/ro/crate/1.1"},
"about": {"@id": "http://example.com/myCrate"}
},
{
"@type": "Dataset",
"@id": "http://example.com/myCrate",
"author": {"@id": "http://example.com/author"},
"datePublished": "2024",
"name": "Test crate",
"description": "This is a detached test create",
"license": {"@id": "http://example.com/license"},
"hasPart": [
{"@id": "http://example.com/file"}
]
},
{
"@id": "http://example.com/author",
"@type": "Person",
"name": "Daniel Bauer"
},
{
"@id": "http://example.com/license",
"@type": "CreativeWork",
"name": "Test License"
},
{
"@id": "http://example.com/file",
"@type": "File",
"contentUrl": "http://example.com/image1.jpg",
"encodingFormat": "image/jpeg"
}
]
},
[
Signpost(LinkRel.type, "http://schema.org/Dataset"),
Signpost(LinkRel.author, "http://example.com/author"),
Signpost(LinkRel.license, "http://example.com/license"),
Signpost(LinkRel.item, "http://example.com/image1.jpg", "image/jpeg"),
],
)

346
uv.lock generated Normal file
View File

@@ -0,0 +1,346 @@
version = 1
requires-python = ">=3.10"
[[package]]
name = "asgiref"
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