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50 lines
1.1 KiB
Plaintext
50 lines
1.1 KiB
Plaintext
# general environment
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bg_color white
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#space cmyk
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set fetch_path, /tmp
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log_open /tmp/pymol_log.pml
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set retain_order
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# interface
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set overlay, 1
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# performance
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set async_builds, on
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set max_threads, 8
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set cache_mode
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set defer_builds_mode, 3
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set hash_max, 500
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# shortcuts
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set_key F1, as lines, solvent
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set_key F2, hide everything, solvent
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set_key F3, as spheres, inorganic and (n. NA or n. K or n. CL or n. CA or n. XE or n. RN)
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set_key F4, hide everything, inorganic and (n. NA or n. K or n. CL or n. CA or n. XE or n. RN)
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set_key F5, as sticks, organic
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set_key F6, hide everything, organic
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set_key F9, set depth_cue
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set_key F10, set depth_cue, off
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set_key F11, ray 800,800
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set_key F12, ray 1600,1600
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# raytrace
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set depth_cue, 0
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set ray_opaque_background, false
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set orthoscopic, 0
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set ray_shadow, false
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#set spec_reflect, 0
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set antialias, 1
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set surface_quality, 1
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set ray_trace_mode, 0
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set valence, 0
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set cartoon_gap_cutoff, 0
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set cartoon_side_chain_helper, 1
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set cartoon_discrete_colors, on
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alias clean, hide everything, hydrogen or n. 1M* or n. 2M*
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alias sf_as_sticks, show_as sticks, resid 479-483; clean
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