mirror of
https://github.com/dnlbauer/dotfiles.git
synced 2026-09-10 21:45:30 +00:00
64 lines
1.5 KiB
Plaintext
64 lines
1.5 KiB
Plaintext
# general environment
|
|
bg_color white
|
|
space cmyk
|
|
set fetch_path, /tmp
|
|
log_open /tmp/pymol_log.pml
|
|
set retain_order
|
|
|
|
|
|
# interface
|
|
set overlay, 1
|
|
set internal_gui_control_size, 10
|
|
set display_scale_factor, 2
|
|
|
|
# performance
|
|
set async_builds, on
|
|
set max_threads, 8
|
|
set cache_mode
|
|
set defer_builds_mode, 3
|
|
set hash_max, 500
|
|
|
|
# shortcuts
|
|
set_key F1, as lines, solvent
|
|
set_key F2, hide everything, solvent
|
|
set_key F3, as spheres, inorganic and (n. NA or n. K or n. CL or n. CA or n. XE or n. RN)
|
|
set_key F4, hide everything, inorganic and (n. NA or n. K or n. CL or n. CA or n. XE or n. RN)
|
|
set_key F5, as sticks, organic
|
|
set_key F6, hide everything, organic
|
|
set_key F9, set depth_cue
|
|
set_key F10, set depth_cue, off
|
|
set_key F11, ray 800,800
|
|
set_key F12, ray 1600,1600
|
|
|
|
#Extending colors with color-blindness friendly color palette
|
|
#References:
|
|
#http://jfly.iam.u-tokyo.ac.jp/html/color_cb/#pallet
|
|
#https://personal.sron.nl/~pault/colourschemes.pdf
|
|
set_color cb_blue, [51, 34, 136]
|
|
set_color cb_tan, [221, 204, 119]
|
|
set_color cb_lightblue, [136, 204, 238]
|
|
set_color cb_green, [17, 119, 51]
|
|
set_color cb_teal, [68, 170, 153]
|
|
set_color cb_gold, [153, 153, 51]
|
|
set_color cb_salmon, [204, 102, 119]
|
|
set_color cb_red, [136, 34, 85]
|
|
set_color cb_pink, [170, 68, 153]
|
|
|
|
# raytrace
|
|
set depth_cue, 0
|
|
set ray_opaque_background, false
|
|
set orthoscopic, 0
|
|
set ray_shadow, false
|
|
set spec_reflect, 0
|
|
set antialias, 0
|
|
set surface_quality, 1
|
|
set ray_trace_mode, 0
|
|
|
|
set valence, 0
|
|
set cartoon_side_chain_helper, 1
|
|
set cartoon_discrete_colors, on
|
|
|
|
alias clean, hide everything, hydrogen
|
|
|
|
|