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33 lines
876 B
Plaintext
33 lines
876 B
Plaintext
# aliases
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if [ -f .cargo/bin/bat ]; then
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alias cat='bat'
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fi
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alias clip='xsel --clipboard'
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alias groclean='rm \#*'
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alias latexclean='for i in `*aux *bbl *blg *fdb_latexmk *fls *lof *log *lot *out *synctex.gz *toc`; do rm $i; done'
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alias ls='ls --color=auto -lh'
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alias workon='source activate' # enable anaconda environ
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alias cwl="cwl-runner"
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# lhr
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alias squeue="ssh lcluster11 squeue"
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alias csum="ssh lcluster11 csum"
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alias csreport="ssh lcluster11 csreport"
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alias scancel="ssh lcluster11 scancel"
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# snakemake use all cores by default
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sm() {
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if [[ "$*" == *"-j"* || "$*" == *"--jobs"* || "$*" == *"--cores"* ]]; then
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snakemake $@
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else
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snakemake -j all $@
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fi
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}
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# extract whatever archive
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alias extract="dtrx"
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# faster sshfs
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#alias sshfs="sshfs -o Ciphers=arcfour,Compression=no,auto_cache"
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#alias sshfs="sshfs -o Compression=no,auto_cache"
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