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pymol

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Daniel Bauer
2019-10-30 11:29:39 +01:00
parent 0f65b7ebee
commit 9eb2f776c8
1 changed files with 4 additions and 3 deletions
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7
profiles/pymol/.pymolrc
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@@ -43,14 +43,15 @@ set cartoon_highlight_color, gray
# spheres # spheres
set sphere_scale, 0.5 set sphere_scale, 0.5
# custom colors
set_color sodium, [0.0, 0.5, 1.0]
# shortcuts # shortcuts
set_key F1, toggle sticks, solvent set_key F1, toggle sticks, solvent
set_key F2, toggle sticks, (r. POPC or r. POP) and not hydrogen set_key F2, toggle sticks, (r. POPC or r. POP) and not hydrogen
set_key F3, toggle spheres, inorganic and (n. NA or n. K) set_key F3, toggle spheres, inorganic and (n. NA or n. K)
set_key F4, toggle spheres, n. CL set_key F4, toggle spheres, n. CL
set_key F9, set depth_cue set_key F9, set depth_cue
set_key F10, set depth_cue, off set_key F10, set depth_cue, off
set_key F11, ray 800,800 set_key F11, ray 800,800
@@ -60,4 +61,4 @@ set_key F12, ray 1600,1600
alias clean, hide everything, hydrogen or n. 1M* or n. 2M* or n. MC* alias clean, hide everything, hydrogen or n. 1M* or n. 2M* or n. MC*
alias sf_as_sticks, show sticks, residue 478-484 and (not hydrogen or (hydrogen and neighbor (elem O+N+S))) and not (n. 1M* or n. 2M* or n. MC*); hide cartoon, resi 479-483; show sticks, residue 475+468 and (not hydrogen or (hydrogen and neighbor (elem O+N+S))) and not (n. 1M* or n. 2M* or n. MC*) alias sf_as_sticks, show sticks, residue 478-484 and (not hydrogen or (hydrogen and neighbor (elem O+N+S))) and not (n. 1M* or n. 2M* or n. MC*); hide cartoon, resi 479-483; show sticks, residue 475+468 and (not hydrogen or (hydrogen and neighbor (elem O+N+S))) and not (n. 1M* or n. 2M* or n. MC*)
alias dockfix, as sticks, bonded and not polymer