Commit Graph

174 Commits

Author SHA1 Message Date
Daniel Bauer
344066cdb8 version 0.9 2018-10-25 11:47:30 +02:00
Daniel Bauer
f0c2830e6d usage 2018-10-25 11:47:17 +02:00
Daniel Bauer
7773ec6c77 remove todo 2018-10-25 11:28:57 +02:00
Daniel Bauer
8e9e06a644 header for final state dump lists bins 2018-10-25 11:24:14 +02:00
Daniel Bauer
b40ad9b516 calculate total bin count during i/o 2018-10-22 10:01:34 +02:00
Daniel Bauer
5842a33f44 more todo 2018-10-21 14:44:12 +02:00
Daniel Bauer
c440f46a82 fix multidimensional io 2018-10-21 14:42:03 +02:00
Daniel Bauer
429224ff3f README 2018-10-21 14:23:05 +02:00
Daniel Bauer
a80b30ceca removed old test for histograms 2018-10-21 14:21:55 +02:00
Daniel Bauer
29d20ae3b3 Merge branch 'master' of github.com:danijoo/WHAM 2018-10-21 14:15:39 +02:00
Daniel Bauer
05f4815c11 fix io tests 2018-10-21 14:15:30 +02:00
Daniel Bauer
b1bc761f3a Update README.md 2018-10-18 21:32:15 +02:00
Daniel Bauer
32df9a14dd Update .travis.yml 2018-10-18 11:12:02 +02:00
Daniel Bauer
b9e3f04e7c Update README.md 2018-10-18 11:10:32 +02:00
Daniel Bauer
857b223d08 Merge pull request #1 from danijoo/ci
Create .travis.yml
2018-10-18 11:07:15 +02:00
Daniel Bauer
02cca79ea0 Create .travis.yml 2018-10-18 11:01:32 +02:00
Daniel Bauer
f7772e594b rename 2018-10-18 10:46:20 +02:00
Daniel Bauer
558c8f6534 add fileextension to 2d timeseries 2018-10-18 01:50:11 +02:00
Daniel Bauer
fe46cba7da typo 2018-10-18 01:43:26 +02:00
Daniel Bauer
b442c89c9d examples in README 2018-10-18 01:42:13 +02:00
Daniel Bauer
b07ae58051 README/LICENSE 2018-10-18 01:34:11 +02:00
Daniel Bauer
65a3306e36 perform unneeded filter 2018-10-18 01:14:12 +02:00
Daniel Bauer
f8cc8b853c iterate F without counter for convergence check 2018-10-18 01:08:32 +02:00
Daniel Bauer
a13ebded6d Merge branch 'precalc' 2018-10-18 01:03:39 +02:00
Daniel Bauer
c835520bf4 comments and code cleanup 2018-10-18 01:03:29 +02:00
Daniel Bauer
6b9661bd13 use exp(F) and exp(U) for wham iterations - huge performance increase! 2018-10-18 00:13:54 +02:00
Daniel Bauer
b064ecea6d calc exp(F/kT) instead of F for each window 2018-10-17 10:21:19 +02:00
Daniel Bauer
40bb99a612 cache exp(-U/kT) instead of U 2018-10-17 10:20:48 +02:00
Daniel Bauer
7fd78fc2a5 normalize P for final dump/output 2018-10-16 22:52:08 +02:00
Daniel Bauer
0cdf300415 gitignore 2018-10-16 21:26:43 +02:00
Daniel Bauer
764804d06f set optlevel and cpu-target=native 2018-10-15 11:19:41 +02:00
Daniel Bauer
b07c88ddf8 integration tests 2018-10-15 00:23:28 +02:00
Daniel Bauer
8b6feced20 smaller example files 2018-10-15 00:03:47 +02:00
Daniel Bauer
83b3b46cc1 ignore failing tests for now. TODO! 2018-10-14 22:55:42 +02:00
Daniel Bauer
7a371b9bb2 small performance improvments? 2018-10-14 22:46:15 +02:00
Daniel Bauer
1da5bc7000 output example 2018-10-14 22:31:27 +02:00
Daniel Bauer
652b6c5c81 use slices instead of vector references 2018-10-14 15:49:00 +02:00
Daniel Bauer
4f3324a057 fix timeseries read in 2018-10-14 13:58:32 +02:00
Daniel Bauer
22fa7709bb cli documentation 2018-10-14 13:58:19 +02:00
Daniel Bauer
6d4160cee6 reuse allocated string for timeseries read 2018-10-14 11:53:44 +02:00
Daniel Bauer
f8b073f120 buffer state dumps and write results 2018-10-14 11:49:39 +02:00
Daniel Bauer
66f9ed2491 Merge branch 'multidimensional' 2018-10-14 11:38:57 +02:00
Daniel Bauer
59a6cc072d WHAM works in N dimensions 2018-10-14 11:36:10 +02:00
Daniel Bauer
29d2dd2b03 partial io for multidimensional WHAM 2018-10-13 15:07:06 +02:00
Daniel Bauer
182a7f10a8 gitignore update 2018-10-11 21:06:31 +02:00
Daniel Bauer
6450839c4a example folders 2018-10-11 20:35:41 +02:00
Daniel Bauer
35e0fbf065 made some field private 2018-10-08 23:02:50 +02:00
Daniel Bauer
88d9146911 use 64 bit floats 2018-10-08 10:13:19 +02:00
Daniel Bauer
23085ab6f1 small performance improvements 2018-10-08 09:48:22 +02:00
Daniel Bauer
5ea437db82 Merge branch 'bias_cache2' 2018-10-07 11:03:49 +02:00